Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YDR230WYDR230W 348 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 RPS27BYHR021C 249 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 YJR085CYJR085C 318 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 YLR346CYLR346C 306 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 ALG8YOR067C 1734 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 CWH41YGL027C 2502 nt4.63□□□□□ -1.67
TY1A-LR1P0CX68 CYM1YDR430C 2970 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 HPC2YBR215W 1878 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 ALY1YKR021W 2748 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 NUP60YAR002W 1620 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 TUP1YCR084C 2142 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 YIL071W-AYIL071W-A 477 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 RPS15YOL040C 429 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 FUI1YBL042C 1920 nt4.62□□□□□ -1.67
TY1A-LR1P0CX68 YGR125WYGR125W 3111 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 SNF3YDL194W 2655 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 ROK1YGL171W 1695 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 VHC1YBR235W 3363 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 MSS11YMR164C 2277 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 FOL1YNL256W 2475 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 TIM13YGR181W 318 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 FAA3YIL009W 2085 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 GPR1YDL035C 2886 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 SSH1YBR283C 1473 nt4.61□□□□□ -1.67
TY1A-LR1P0CX68 SSH4YKL124W 1740 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 TPO2YGR138C 1845 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 VIP1YLR410W 3441 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 SAE3YHR079C-A 276 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 YMR321CYMR321C 318 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 YPR063CYPR063C 423 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 AXL2YIL140W 2472 nt4.6□□□□□ -1.67
TY1A-LR1P0CX68 SFI1YLL003W 2841 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 YCR075W-AYCR075W-A 228 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 HPA3YEL066W 540 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 YGL217CYGL217C 342 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 YHL041WYHL041W 450 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 RPR1RPR1 369 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 YOR161W-BYOR161W-B 261 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 snR46snR46 197 nt4.59□□□□□ -1.67
TY1A-LR1P0CX68 MNT3YIL014W 1893 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 PEX8YGR077C 1770 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 TPS2YDR074W 2691 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 GCG1YER163C 699 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 RPL32YBL092W 393 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 HHT1YBR010W 411 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 YER077CYER077C 2067 nt4.58□□□□□ -1.68
TY1A-LR1P0CX68 NUP116YMR047C 3342 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 PHM7YOL084W 2976 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 FBP1YLR377C 1047 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 MRPL33YMR286W 261 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 YNL042W-BYNL042W-B 258 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 snR17bsnR17b 332 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 AI5_ALPHAQ0070 1893 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 YGR250CYGR250C 2346 nt4.57□□□□□ -1.68
TY1A-LR1P0CX68 HAP1YLR256W 4509 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 ARN1YHL040C 1884 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 RPS29BYDL061C 171 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 ECM34YHL043W 513 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 PFK26YIL107C 2484 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 PCA1YBR295W 3651 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 PRP42YDR235W 1635 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 NNK1YKL171W 2787 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 SSY1YDR160W 2559 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 VPS64YDR200C 1815 nt4.56□□□□□ -1.68
TY1A-LR1P0CX68 STE20YHL007C 2820 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 PDS5YMR076C 3834 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 CWC22YGR278W 1734 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 AUA1YFL010W-A 285 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 NKP2YLR315W 462 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 CSE2YNR010W 450 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 NRP1YDL167C 2160 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 KRE6YPR159W 2163 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 IMH1YLR309C 2736 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 BBC1YJL020C 3474 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 MDR1YGR100W 2853 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 ARG5,6YER069W 2592 nt4.55□□□□□ -1.68
TY1A-LR1P0CX68 RSC3YDR303C 2658 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 snR72snR72 98 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 YDR426CYDR426C 378 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 CUP2YGL166W 678 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 PAU23YLR037C 375 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 YLR120W-AYLR120W-A 102 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 UPC2YDR213W 2742 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 UBP5YER144C 2418 nt4.54□□□□□ -1.68
TY1A-LR1P0CX68 CCW14YLR390W-A 717 nt4.53□□□□□ -1.68
TY1A-LR1P0CX68 YOR376WYOR376W 369 nt4.53□□□□□ -1.68
TY1A-LR1P0CX68 ISU1YPL135W 498 nt4.53□□□□□ -1.68
TY1A-LR1P0CX68 TOF2YKR010C 2316 nt4.53□□□□□ -1.68
TY1A-LR1P0CX68 SEG2YKL105C 3399 nt4.53□□□□□ -1.68
TY1A-LR1P0CX68 VID22YLR373C 2706 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 TRM2YKR056W 1920 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 TSA2YDR453C 591 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 RPL28YGL103W 450 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 RPL36AYMR194W 303 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 HHF1YBR009C 312 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 PRP43YGL120C 2304 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 PRR1YKL116C 1557 nt4.52□□□□□ -1.69
TY1A-LR1P0CX68 CDC45YLR103C 1953 nt4.51□□□□□ -1.69
TY1A-LR1P0CX68 SEC39YLR440C 2130 nt4.51□□□□□ -1.69
TY1A-LR1P0CX68 KIP2YPL155C 2121 nt4.51□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms