Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.33■□□□□ 0.36
CD74P04233 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.33■□□□□ 0.36
CD74P04233 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD74P04233 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CD74P04233 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD74P04233 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.32■□□□□ 0.36
CD74P04233 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.32■□□□□ 0.36
CD74P04233 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.32■□□□□ 0.36
CD74P04233 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CD74P04233 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.32■□□□□ 0.36
CD74P04233 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CD74P04233 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CD74P04233 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.31■□□□□ 0.36
CD74P04233 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 SMUG1P1-201ENST00000590640 811 ntBASIC17.31■□□□□ 0.36
CD74P04233 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.31■□□□□ 0.36
CD74P04233 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD74P04233 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CD74P04233 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CD74P04233 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CD74P04233 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 UNC93B8-201ENST00000511903 705 ntBASIC17.3■□□□□ 0.36
CD74P04233 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.3■□□□□ 0.36
CD74P04233 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CD74P04233 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CD74P04233 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CD74P04233 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CD74P04233 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CD74P04233 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
CD74P04233 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.29■□□□□ 0.36
CD74P04233 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CD74P04233 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CD74P04233 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.28■□□□□ 0.36
CD74P04233 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CD74P04233 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CD74P04233 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms