Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.49■□□□□ 0.87
S1PR4O95977 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.49■□□□□ 0.87
S1PR4O95977 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.49■□□□□ 0.87
S1PR4O95977 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.49■□□□□ 0.87
S1PR4O95977 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 AC243732.1-201ENST00000612648 864 ntBASIC20.49■□□□□ 0.87
S1PR4O95977 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.49■□□□□ 0.87
S1PR4O95977 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.49■□□□□ 0.87
S1PR4O95977 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.49■□□□□ 0.87
S1PR4O95977 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
S1PR4O95977 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
S1PR4O95977 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
S1PR4O95977 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 RBM17P2-201ENST00000616397 1405 ntBASIC20.48■□□□□ 0.87
S1PR4O95977 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.48■□□□□ 0.87
S1PR4O95977 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.48■□□□□ 0.87
S1PR4O95977 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
S1PR4O95977 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
S1PR4O95977 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 AC116050.2-201ENST00000612102 1779 ntBASIC20.47■□□□□ 0.87
S1PR4O95977 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.47■□□□□ 0.87
S1PR4O95977 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 AC091799.1-201ENST00000422823 811 ntBASIC20.47■□□□□ 0.87
S1PR4O95977 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.47■□□□□ 0.87
S1PR4O95977 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.47■□□□□ 0.87
S1PR4O95977 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.47■□□□□ 0.87
S1PR4O95977 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.47■□□□□ 0.87
S1PR4O95977 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.47■□□□□ 0.87
S1PR4O95977 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.47■□□□□ 0.87
S1PR4O95977 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.47■□□□□ 0.87
S1PR4O95977 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.47■□□□□ 0.87
S1PR4O95977 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
S1PR4O95977 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
S1PR4O95977 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.46■□□□□ 0.87
S1PR4O95977 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.46■□□□□ 0.87
S1PR4O95977 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.46■□□□□ 0.87
S1PR4O95977 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.46■□□□□ 0.87
S1PR4O95977 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
S1PR4O95977 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.46■□□□□ 0.87
S1PR4O95977 UBE2DNL-204ENST00000602536 740 ntBASIC20.46■□□□□ 0.87
S1PR4O95977 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
S1PR4O95977 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
S1PR4O95977 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
S1PR4O95977 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
S1PR4O95977 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
S1PR4O95977 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.45■□□□□ 0.86
S1PR4O95977 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.45■□□□□ 0.86
S1PR4O95977 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
S1PR4O95977 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
S1PR4O95977 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
S1PR4O95977 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
S1PR4O95977 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
S1PR4O95977 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR4O95977 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.44■□□□□ 0.86
S1PR4O95977 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.44■□□□□ 0.86
S1PR4O95977 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
S1PR4O95977 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR4O95977 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
S1PR4O95977 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.44■□□□□ 0.86
S1PR4O95977 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.44■□□□□ 0.86
S1PR4O95977 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms