Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC27.62■■■□□ 2.01
LTN1O94822 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
LTN1O94822 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.62■■■□□ 2.01
LTN1O94822 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
LTN1O94822 AC124016.1-201ENST00000609552 612 ntBASIC27.62■■■□□ 2.01
LTN1O94822 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC27.62■■■□□ 2.01
LTN1O94822 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
LTN1O94822 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC27.61■■■□□ 2.01
LTN1O94822 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.61■■■□□ 2.01
LTN1O94822 SNORA78-201ENST00000459373 127 ntBASIC27.61■■■□□ 2.01
LTN1O94822 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
LTN1O94822 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC27.61■■■□□ 2.01
LTN1O94822 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
LTN1O94822 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LTN1O94822 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC27.6■■■□□ 2.01
LTN1O94822 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LTN1O94822 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LTN1O94822 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
LTN1O94822 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
LTN1O94822 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 SERF2-207ENST00000409614 582 ntTSL 2 BASIC27.59■■■□□ 2.01
LTN1O94822 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC27.59■■■□□ 2.01
LTN1O94822 LY6E-205ENST00000519611 635 ntTSL 3 BASIC27.59■■■□□ 2.01
LTN1O94822 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC27.59■■■□□ 2.01
LTN1O94822 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
LTN1O94822 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC27.58■■■□□ 2.01
LTN1O94822 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.58■■■□□ 2.01
LTN1O94822 MTDHP1-201ENST00000605323 784 ntBASIC27.58■■■□□ 2.01
LTN1O94822 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
LTN1O94822 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
LTN1O94822 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC27.58■■■□□ 2.01
LTN1O94822 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
LTN1O94822 PGM5P4-201ENST00000421970 445 ntBASIC27.58■■■□□ 2
LTN1O94822 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
LTN1O94822 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.58■■■□□ 2
LTN1O94822 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.58■■■□□ 2
LTN1O94822 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC27.57■■■□□ 2
LTN1O94822 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.57■■■□□ 2
LTN1O94822 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.57■■■□□ 2
LTN1O94822 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
LTN1O94822 AC073912.3-201ENST00000624414 853 ntBASIC27.57■■■□□ 2
LTN1O94822 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
LTN1O94822 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.57■■■□□ 2
LTN1O94822 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.57■■■□□ 2
LTN1O94822 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC27.56■■■□□ 2
LTN1O94822 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC27.56■■■□□ 2
LTN1O94822 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC27.56■■■□□ 2
LTN1O94822 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
LTN1O94822 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
LTN1O94822 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
LTN1O94822 RN7SL471P-201ENST00000580476 299 ntBASIC27.56■■■□□ 2
LTN1O94822 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC27.56■■■□□ 2
LTN1O94822 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
LTN1O94822 GUSBP5-202ENST00000510805 1989 ntBASIC27.56■■■□□ 2
LTN1O94822 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
LTN1O94822 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC27.56■■■□□ 2
LTN1O94822 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
LTN1O94822 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
LTN1O94822 AC239809.2-201ENST00000415381 517 ntBASIC27.55■■■□□ 2
LTN1O94822 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC27.55■■■□□ 2
LTN1O94822 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27.55■■■□□ 2
LTN1O94822 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.55■■■□□ 2
LTN1O94822 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC27.55■■■□□ 2
LTN1O94822 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC27.55■■■□□ 2
LTN1O94822 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.55■■■□□ 2
LTN1O94822 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC27.55■■■□□ 2
LTN1O94822 AC133681.1-201ENST00000465482 601 ntBASIC27.55■■■□□ 2
LTN1O94822 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC27.55■■■□□ 2
LTN1O94822 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC27.55■■■□□ 2
LTN1O94822 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.54■■■□□ 2
LTN1O94822 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
LTN1O94822 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
LTN1O94822 RER1-204ENST00000378518 522 ntTSL 3 BASIC27.54■■■□□ 2
LTN1O94822 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.54■■■□□ 2
LTN1O94822 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27.54■■■□□ 2
LTN1O94822 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
LTN1O94822 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC27.54■■■□□ 2
LTN1O94822 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms