Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.82■□□□□ 0.92
USP1O94782 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.82■□□□□ 0.92
USP1O94782 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.82■□□□□ 0.92
USP1O94782 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP1O94782 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
USP1O94782 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
USP1O94782 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 KRT16P2-201ENST00000414673 1423 ntBASIC20.81■□□□□ 0.92
USP1O94782 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.81■□□□□ 0.92
USP1O94782 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.81■□□□□ 0.92
USP1O94782 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.81■□□□□ 0.92
USP1O94782 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.81■□□□□ 0.92
USP1O94782 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.81■□□□□ 0.92
USP1O94782 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.81■□□□□ 0.92
USP1O94782 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.81■□□□□ 0.92
USP1O94782 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP1O94782 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.81■□□□□ 0.92
USP1O94782 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.81■□□□□ 0.92
USP1O94782 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
USP1O94782 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.8■□□□□ 0.92
USP1O94782 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 AC010141.2-201ENST00000452426 721 ntBASIC20.8■□□□□ 0.92
USP1O94782 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
USP1O94782 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
USP1O94782 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.79■□□□□ 0.92
USP1O94782 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 AC123595.1-201ENST00000440769 1046 ntBASIC20.79■□□□□ 0.92
USP1O94782 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
USP1O94782 RARRES2P11-201ENST00000635158 484 ntBASIC20.79■□□□□ 0.92
USP1O94782 AC027702.1-201ENST00000563810 1770 ntBASIC20.79■□□□□ 0.92
USP1O94782 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP1O94782 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.79■□□□□ 0.92
USP1O94782 AC007952.6-201ENST00000573168 2673 ntBASIC20.79■□□□□ 0.92
USP1O94782 AC003957.1-201ENST00000625108 2673 ntBASIC20.79■□□□□ 0.92
USP1O94782 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
USP1O94782 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.78■□□□□ 0.92
USP1O94782 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.78■□□□□ 0.92
USP1O94782 AC120498.10-201ENST00000621827 505 ntBASIC20.78■□□□□ 0.92
USP1O94782 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP1O94782 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP1O94782 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.78■□□□□ 0.92
USP1O94782 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
USP1O94782 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 FP700111.2-201ENST00000619190 1892 ntBASIC20.77■□□□□ 0.92
USP1O94782 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
USP1O94782 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
USP1O94782 AC026271.2-201ENST00000428091 497 ntBASIC20.77■□□□□ 0.92
USP1O94782 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.77■□□□□ 0.92
USP1O94782 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms