Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CDH16O75309 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH16O75309 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.81■□□□□ 0.92
CDH16O75309 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.81■□□□□ 0.92
CDH16O75309 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDH16O75309 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH16O75309 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH16O75309 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH16O75309 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CDH16O75309 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH16O75309 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH16O75309 AC133561.4-201ENST00000566112 224 ntBASIC20.8■□□□□ 0.92
CDH16O75309 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH16O75309 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 SMG8-203ENST00000578922 2178 ntBASIC20.8■□□□□ 0.92
CDH16O75309 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH16O75309 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CDH16O75309 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH16O75309 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH16O75309 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH16O75309 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH16O75309 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH16O75309 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH16O75309 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH16O75309 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CDH16O75309 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH16O75309 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH16O75309 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH16O75309 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDH16O75309 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH16O75309 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.78■□□□□ 0.92
CDH16O75309 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH16O75309 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH16O75309 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.78■□□□□ 0.92
CDH16O75309 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 TCF3P1-201ENST00000423021 1937 ntBASIC20.78■□□□□ 0.92
CDH16O75309 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
CDH16O75309 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDH16O75309 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH16O75309 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH16O75309 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDH16O75309 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDH16O75309 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDH16O75309 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH16O75309 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH16O75309 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.77■□□□□ 0.92
CDH16O75309 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
CDH16O75309 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDH16O75309 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH16O75309 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH16O75309 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDH16O75309 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH16O75309 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
CDH16O75309 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.76■□□□□ 0.91
CDH16O75309 AC131281.2-201ENST00000520478 145 ntBASIC20.76■□□□□ 0.91
CDH16O75309 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDH16O75309 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDH16O75309 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDH16O75309 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms