Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 LETM1P2-201ENST00000597330 2178 ntBASIC17.59■□□□□ 0.41
SSNA1O43805 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSNA1O43805 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SSNA1O43805 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
SSNA1O43805 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
SSNA1O43805 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSNA1O43805 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.58■□□□□ 0.41
SSNA1O43805 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSNA1O43805 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSNA1O43805 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSNA1O43805 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.58■□□□□ 0.41
SSNA1O43805 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 AC079089.2-201ENST00000531211 1277 ntBASIC17.58■□□□□ 0.4
SSNA1O43805 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.58■□□□□ 0.4
SSNA1O43805 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SSNA1O43805 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.58■□□□□ 0.4
SSNA1O43805 AC007225.1-201ENST00000566331 1836 ntBASIC17.58■□□□□ 0.4
SSNA1O43805 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 AL162377.1-201ENST00000618844 1793 ntBASIC17.58■□□□□ 0.4
SSNA1O43805 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSNA1O43805 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.58■□□□□ 0.4
SSNA1O43805 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.58■□□□□ 0.4
SSNA1O43805 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.57■□□□□ 0.4
SSNA1O43805 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.57■□□□□ 0.4
SSNA1O43805 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
SSNA1O43805 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.57■□□□□ 0.4
SSNA1O43805 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.57■□□□□ 0.4
SSNA1O43805 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.57■□□□□ 0.4
SSNA1O43805 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.57■□□□□ 0.4
SSNA1O43805 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SSNA1O43805 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSNA1O43805 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.56■□□□□ 0.4
SSNA1O43805 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.56■□□□□ 0.4
SSNA1O43805 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 AC120024.1-201ENST00000562672 995 ntBASIC17.56■□□□□ 0.4
SSNA1O43805 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SSNA1O43805 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
SSNA1O43805 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSNA1O43805 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SSNA1O43805 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.55■□□□□ 0.4
SSNA1O43805 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 BCL2-203ENST00000589955 5011 ntBASIC17.55■□□□□ 0.4
SSNA1O43805 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.55■□□□□ 0.4
SSNA1O43805 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSNA1O43805 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms