Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.14■□□□□ 0.65
NKX2-8O15522 MIR1224-201ENST00000408193 85 ntBASIC19.14■□□□□ 0.65
NKX2-8O15522 FAM210CP-201ENST00000445714 574 ntBASIC19.14■□□□□ 0.65
NKX2-8O15522 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-8O15522 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.14■□□□□ 0.65
NKX2-8O15522 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.14■□□□□ 0.65
NKX2-8O15522 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.14■□□□□ 0.65
NKX2-8O15522 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.14■□□□□ 0.65
NKX2-8O15522 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.14■□□□□ 0.65
NKX2-8O15522 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NKX2-8O15522 MTDHP1-201ENST00000605323 784 ntBASIC19.14■□□□□ 0.65
NKX2-8O15522 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-8O15522 C9orf163-202ENST00000624034 2573 ntBASIC19.14■□□□□ 0.65
NKX2-8O15522 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NKX2-8O15522 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NKX2-8O15522 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.13■□□□□ 0.65
NKX2-8O15522 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 RPS2P55-201ENST00000397318 883 ntBASIC19.13■□□□□ 0.65
NKX2-8O15522 TSPY7P-201ENST00000431358 1114 ntBASIC19.13■□□□□ 0.65
NKX2-8O15522 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 AC107956.1-201ENST00000494359 873 ntBASIC19.13■□□□□ 0.65
NKX2-8O15522 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.13■□□□□ 0.65
NKX2-8O15522 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
NKX2-8O15522 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 AC233702.5-201ENST00000584107 538 ntBASIC19.13■□□□□ 0.65
NKX2-8O15522 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
NKX2-8O15522 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.13■□□□□ 0.65
NKX2-8O15522 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
NKX2-8O15522 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NKX2-8O15522 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-8O15522 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-8O15522 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.12■□□□□ 0.65
NKX2-8O15522 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.12■□□□□ 0.65
NKX2-8O15522 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NKX2-8O15522 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-8O15522 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX2-8O15522 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
NKX2-8O15522 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-8O15522 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
NKX2-8O15522 AC012618.2-201ENST00000428058 849 ntBASIC19.11■□□□□ 0.65
NKX2-8O15522 BX088651.1-201ENST00000540551 451 ntBASIC19.11■□□□□ 0.65
NKX2-8O15522 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.11■□□□□ 0.65
NKX2-8O15522 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 LINC01023-201ENST00000606054 436 ntBASIC19.11■□□□□ 0.65
NKX2-8O15522 AC124016.1-201ENST00000609552 612 ntBASIC19.11■□□□□ 0.65
NKX2-8O15522 AC006557.6-201ENST00000623071 864 ntBASIC19.11■□□□□ 0.65
NKX2-8O15522 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
NKX2-8O15522 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
NKX2-8O15522 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NKX2-8O15522 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-8O15522 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-8O15522 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-8O15522 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.1■□□□□ 0.65
NKX2-8O15522 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
NKX2-8O15522 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.1■□□□□ 0.65
NKX2-8O15522 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.1■□□□□ 0.65
NKX2-8O15522 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.1■□□□□ 0.65
NKX2-8O15522 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NKX2-8O15522 AC120498.8-201ENST00000614275 531 ntBASIC19.1■□□□□ 0.65
NKX2-8O15522 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms