Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
UBFD1O14562 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 AC099778.1-201ENST00000568593 1911 ntBASIC20.03■□□□□ 0.8
UBFD1O14562 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.03■□□□□ 0.8
UBFD1O14562 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UBFD1O14562 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
UBFD1O14562 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
UBFD1O14562 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.02■□□□□ 0.8
UBFD1O14562 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
UBFD1O14562 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UBFD1O14562 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.02■□□□□ 0.8
UBFD1O14562 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.02■□□□□ 0.8
UBFD1O14562 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.02■□□□□ 0.8
UBFD1O14562 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.02■□□□□ 0.8
UBFD1O14562 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.02■□□□□ 0.8
UBFD1O14562 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.02■□□□□ 0.8
UBFD1O14562 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
UBFD1O14562 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UBFD1O14562 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UBFD1O14562 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.02■□□□□ 0.79
UBFD1O14562 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.02■□□□□ 0.79
UBFD1O14562 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
UBFD1O14562 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UBFD1O14562 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBFD1O14562 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.01■□□□□ 0.79
UBFD1O14562 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 AC142381.2-201ENST00000566120 298 ntBASIC20.01■□□□□ 0.79
UBFD1O14562 AC138907.5-202ENST00000569484 235 ntBASIC20.01■□□□□ 0.79
UBFD1O14562 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 AC008175.2-201ENST00000612840 297 ntBASIC20.01■□□□□ 0.79
UBFD1O14562 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.01■□□□□ 0.79
UBFD1O14562 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UBFD1O14562 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
UBFD1O14562 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UBFD1O14562 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20■□□□□ 0.79
UBFD1O14562 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20■□□□□ 0.79
UBFD1O14562 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20■□□□□ 0.79
UBFD1O14562 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20■□□□□ 0.79
UBFD1O14562 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.99■□□□□ 0.79
UBFD1O14562 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBFD1O14562 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
UBFD1O14562 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBFD1O14562 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBFD1O14562 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBFD1O14562 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.98■□□□□ 0.79
UBFD1O14562 IRS3P-201ENST00000223076 1006 ntBASIC19.98■□□□□ 0.79
UBFD1O14562 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms