Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK2O00526 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
UPK2O00526 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK2O00526 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 AC120498.10-201ENST00000621827 505 ntBASIC16.54■□□□□ 0.24
UPK2O00526 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK2O00526 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UPK2O00526 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.53■□□□□ 0.24
UPK2O00526 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UPK2O00526 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 AC027612.3-201ENST00000413684 1047 ntBASIC16.53■□□□□ 0.24
UPK2O00526 AC245052.3-201ENST00000450182 901 ntBASIC16.53■□□□□ 0.24
UPK2O00526 AC105265.2-201ENST00000467189 838 ntBASIC16.53■□□□□ 0.24
UPK2O00526 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK2O00526 RARRES2P11-201ENST00000635158 484 ntBASIC16.53■□□□□ 0.24
UPK2O00526 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK2O00526 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK2O00526 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.52■□□□□ 0.24
UPK2O00526 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UPK2O00526 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK2O00526 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.52■□□□□ 0.24
UPK2O00526 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UPK2O00526 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK2O00526 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
UPK2O00526 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UPK2O00526 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.52■□□□□ 0.23
UPK2O00526 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
UPK2O00526 LINC02228-203ENST00000641970 1355 ntBASIC16.51■□□□□ 0.23
UPK2O00526 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.51■□□□□ 0.23
UPK2O00526 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UPK2O00526 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
UPK2O00526 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UPK2O00526 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.51■□□□□ 0.23
UPK2O00526 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK2O00526 AC010141.2-201ENST00000452426 721 ntBASIC16.51■□□□□ 0.23
UPK2O00526 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.51■□□□□ 0.23
UPK2O00526 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.51■□□□□ 0.23
UPK2O00526 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
UPK2O00526 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UPK2O00526 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UPK2O00526 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
UPK2O00526 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK2O00526 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.5■□□□□ 0.23
UPK2O00526 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
UPK2O00526 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.5■□□□□ 0.23
UPK2O00526 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UPK2O00526 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UPK2O00526 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms