Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 AC013268.1-206ENST00000638368 961 ntBASIC20.53■□□□□ 0.88
CFAP99D6REC4 AC112229.1-201ENST00000639295 961 ntBASIC20.53■□□□□ 0.88
CFAP99D6REC4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CFAP99D6REC4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
CFAP99D6REC4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CFAP99D6REC4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.52■□□□□ 0.88
CFAP99D6REC4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.52■□□□□ 0.88
CFAP99D6REC4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 AC092437.1-201ENST00000624794 1048 ntBASIC20.52■□□□□ 0.88
CFAP99D6REC4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CFAP99D6REC4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CFAP99D6REC4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.52■□□□□ 0.87
CFAP99D6REC4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
CFAP99D6REC4 AC092667.1-201ENST00000434301 2586 ntBASIC20.51■□□□□ 0.87
CFAP99D6REC4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 AC073130.3-201ENST00000624389 2278 ntBASIC20.51■□□□□ 0.87
CFAP99D6REC4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 AC092666.2-201ENST00000613287 246 ntBASIC20.51■□□□□ 0.87
CFAP99D6REC4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.51■□□□□ 0.87
CFAP99D6REC4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CFAP99D6REC4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 AC004911.1-201ENST00000416316 871 ntBASIC20.5■□□□□ 0.87
CFAP99D6REC4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 AF106564.1-201ENST00000607058 2553 ntBASIC20.5■□□□□ 0.87
CFAP99D6REC4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CFAP99D6REC4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CFAP99D6REC4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 AC231657.2-201ENST00000624556 255 ntBASIC20.49■□□□□ 0.87
CFAP99D6REC4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CFAP99D6REC4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.49■□□□□ 0.87
CFAP99D6REC4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CFAP99D6REC4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms