Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TMEM88BA6NKF7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 ABCB10P4-201ENST00000566803 2184 ntBASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 METTL23-204ENST00000586752 904 ntTSL 2 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.31■■□□□ 1.48
TMEM88BA6NKF7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC24.3■■□□□ 1.48
TMEM88BA6NKF7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 AL390719.1-204ENST00000412397 1219 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 NUDT16P1-203ENST00000513809 620 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 AC073195.1-201ENST00000607241 877 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 AC091076.1-201ENST00000610741 619 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 REXO1L10P-201ENST00000615707 1290 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 CYP2D8P-201ENST00000433633 1490 ntBASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TMEM88BA6NKF7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 RER1-204ENST00000378518 522 ntTSL 3 BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 KRT16P5-201ENST00000455284 522 ntBASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TMEM88BA6NKF7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 AC010947.1-201ENST00000623454 693 ntBASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TMEM88BA6NKF7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 LINC01124-201ENST00000409786 2117 ntBASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 KRT18P56-201ENST00000507275 550 ntBASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TMEM88BA6NKF7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TMEM88BA6NKF7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms