Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 CYP21A1P-202ENST00000354927 1481 ntBASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TBC1D3FA6NER0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
TBC1D3FA6NER0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TBC1D3FA6NER0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 AC079834.2-201ENST00000609776 1949 ntBASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 AC026366.1-201ENST00000488803 879 ntBASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TBC1D3FA6NER0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 AP003097.1-201ENST00000530657 1135 ntBASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 AC060766.5-201ENST00000590539 871 ntBASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TBC1D3FA6NER0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 AC128676.1-201ENST00000454392 318 ntBASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 HLA-B-256ENST00000639848 1089 ntBASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TBC1D3FA6NER0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.54■□□□□ 0.88
TBC1D3FA6NER0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms