Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC091305.1-201ENST00000479476 895 ntBASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC055733.4-201ENST00000638462 1354 ntBASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
RNF103-CHMP3A0A140T963 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF103-CHMP3A0A140T963 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC005224.4-201ENST00000583262 1652 ntBASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF103-CHMP3A0A140T963 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 BX005040.4-201ENST00000637145 1518 ntBASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 MIR572-201ENST00000384983 95 ntBASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF103-CHMP3A0A140T963 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF103-CHMP3A0A140T963 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF103-CHMP3A0A140T963 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RNF103-CHMP3A0A140T963 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF103-CHMP3A0A140T963 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF103-CHMP3A0A140T963 AIRN-201ENST00000601203 4374 ntBASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 AL031432.3-201ENST00000607698 485 ntBASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 AFG3L1P-217ENST00000557444 2447 ntBASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF103-CHMP3A0A140T963 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms