Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
IGHV4-28A0A0C4DH34 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 Z98882.1-201ENST00000622160 2253 ntBASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC007322.3-201ENST00000426526 701 ntBASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 FAM21FP-204ENST00000608637 956 ntBASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 LINC00565-201ENST00000562710 2331 ntBASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
IGHV4-28A0A0C4DH34 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 MIPEPP3-201ENST00000412105 444 ntBASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 BX276092.2-201ENST00000417668 665 ntBASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC010980.2-201ENST00000587099 1412 ntBASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
IGHV4-28A0A0C4DH34 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MIR4758-201ENST00000577688 71 ntBASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IGHV4-28A0A0C4DH34 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 AC098934.4-201ENST00000564127 592 ntBASIC14.87□□□□□ -0.03
IGHV4-28A0A0C4DH34 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms