Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 AC087633.2-202ENST00000565166 1439 ntBASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV17A0A0B4J275 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 AC008550.1-201ENST00000511500 884 ntBASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 C1QBPP2-201ENST00000528754 825 ntBASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV17A0A0B4J275 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 RPPH1-201ENST00000516869 333 ntBASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 GUSBP5-202ENST00000510805 1989 ntBASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV17A0A0B4J275 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 MIR718-201ENST00000390190 70 ntBASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 RN7SL471P-201ENST00000580476 299 ntBASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV17A0A0B4J275 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms