Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 AL356441.2-201ENST00000443009 864 ntBASIC16■□□□□ 0.15
TRAV5A0A0B4J249 AC133561.4-201ENST00000566112 224 ntBASIC16■□□□□ 0.15
TRAV5A0A0B4J249 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV5A0A0B4J249 AC099778.1-201ENST00000568593 1911 ntBASIC16■□□□□ 0.15
TRAV5A0A0B4J249 AC055733.4-201ENST00000638462 1354 ntBASIC16■□□□□ 0.15
TRAV5A0A0B4J249 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 AC009237.3-201ENST00000393279 1427 ntBASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 BX005040.4-201ENST00000637145 1518 ntBASIC15.99■□□□□ 0.15
TRAV5A0A0B4J249 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV5A0A0B4J249 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 BX842568.3-201ENST00000418104 571 ntBASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV5A0A0B4J249 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV5A0A0B4J249 AC131281.2-201ENST00000520478 145 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms