Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 CDV3P1-201ENST00000471403 739 ntBASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV7-1A0A0A6YYK4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRBV7-1A0A0A6YYK4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC091799.1-201ENST00000422823 811 ntBASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC007322.3-201ENST00000426526 701 ntBASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TERF1P5-201ENST00000477545 1207 ntBASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC010536.3-201ENST00000620306 533 ntBASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AL162430.1-201ENST00000480705 870 ntBASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC013268.1-206ENST00000638368 961 ntBASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AC112229.1-201ENST00000639295 961 ntBASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV7-1A0A0A6YYK4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms