Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-1A0A0A6YYK1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 DUX4L19-201ENST00000557448 1267 ntBASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC099778.1-201ENST00000568593 1911 ntBASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AL162377.1-201ENST00000618844 1793 ntBASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 MIR4466-201ENST00000606121 54 ntBASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV8-1A0A0A6YYK1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms