Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ZNF232-208ENST00000575898 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ZNF18-205ENST00000580613 2250 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 FAM98B-203ENST00000491535 3111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 HNRNPKP1-201ENST00000510896 1379 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 LINC01514-201ENST00000434189 1338 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 CCDC181-201ENST00000367805 1914 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 KC6-207ENST00000600644 2311 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 COPZ1-212ENST00000551779 1462 ntAPPRIS ALT1 TSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC011195.2-201ENST00000583666 1486 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 LGALS14-201ENST00000360675 773 ntAPPRIS P3 TSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 RNA5SP174-201ENST00000362702 118 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 GAPDHP72-201ENST00000402643 1010 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 RPL36A-HNRNPH2-201ENST00000409170 562 ntAPPRIS P1 TSL 4 BASIC9.88□□□□□ -0.83
SLC1A1P43005 RNA5SP158-201ENST00000410298 102 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 SOX9-AS1-201ENST00000412640 635 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL353604.1-201ENST00000413901 596 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 LINC01946-201ENST00000416279 418 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL136528.2-201ENST00000416554 351 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 LINC01006-203ENST00000425712 661 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC108488.1-205ENST00000438482 914 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL355990.2-201ENST00000440688 508 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC073346.1-201ENST00000441928 651 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC012558.1-201ENST00000451946 622 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 SEM1-210ENST00000488005 775 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 RNA5SP459-201ENST00000516628 100 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 AP003063.1-201ENST00000528496 855 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC004858.1-201ENST00000554078 242 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 AKR1B10P2-201ENST00000577332 927 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 THRA1/BTR-202ENST00000581362 902 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL357137.1-201ENST00000604645 203 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 AL031587.4-201ENST00000609265 691 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 HIST1H4G-201ENST00000611444 297 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
SLC1A1P43005 LARS-216ENST00000618084 720 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 ZNF195-229ENST00000618467 440 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 NPIPB2-207ENST00000620285 1216 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 SLMAP-203ENST00000383718 6749 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 POU6F2-207ENST00000518318 5925 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 APOL2-202ENST00000358502 2551 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 SYNPO2-204ENST00000448416 4298 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AJ003147.3-201ENST00000622989 2199 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC010643.1-201ENST00000599433 3263 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 GRSF1-203ENST00000502323 1794 ntTSL 5 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
SLC1A1P43005 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC9.88□□□□□ -0.83
SLC1A1P43005 AC012409.5-201ENST00000624746 3424 ntBASIC9.88□□□□□ -0.83
SLC1A1P43005 FAM69A-203ENST00000613902 2468 ntTSL 4 BASIC9.88□□□□□ -0.83
SLC1A1P43005 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 AL031118.1-201ENST00000607727 2955 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 MSS51-201ENST00000299432 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 CHRNA6-205ENST00000534622 1872 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 PANX3-201ENST00000284288 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 EIF2B3-203ENST00000372183 1457 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 RABGEF1-201ENST00000284957 3733 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 AP005060.1-201ENST00000623868 3174 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 LINC01184-203ENST00000501652 1601 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 HIGD1B-201ENST00000253410 635 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 OR14K1-201ENST00000283225 945 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SLC1A1P43005 SLPI-201ENST00000338380 596 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 RPS10-202ENST00000344700 650 ntTSL 3 BASIC9.87□□□□□ -0.83
SLC1A1P43005 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 ASAH2B-201ENST00000374006 632 ntTSL 3 BASIC9.87□□□□□ -0.83
SLC1A1P43005 LGALS14-202ENST00000392052 774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SLC1A1P43005 FAM96AP2-201ENST00000414727 477 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 AC092373.1-201ENST00000414951 490 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC9.87□□□□□ -0.83
SLC1A1P43005 SMYD3-IT1-201ENST00000426929 361 ntTSL 2 BASIC9.87□□□□□ -0.83
SLC1A1P43005 AC114402.1-201ENST00000427282 328 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 AL035411.1-201ENST00000427762 690 ntBASIC9.87□□□□□ -0.83
SLC1A1P43005 FRY-AS1-201ENST00000428419 1115 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms