Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 XRN2-201ENST00000377191 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 CPNE4-210ENST00000512332 2230 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 NTRK3-220ENST00000626019 2741 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 SCAF11-205ENST00000465950 5296 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 DMRTC1B-201ENST00000334036 1197 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 SNRPD2-201ENST00000342669 901 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 SH3BGR-204ENST00000380637 1014 ntTSL 3 BASIC9.9□□□□□ -0.82
SLC1A1P43005 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 OSTCP6-201ENST00000407493 457 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 AC092035.1-201ENST00000418538 390 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 HNRNPA1P70-201ENST00000420836 1087 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 AC005301.1-201ENST00000423580 875 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 AL772155.1-201ENST00000431077 347 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 BMF-203ENST00000431415 492 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 IGFL2-202ENST00000434646 885 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 ZNF175-202ENST00000436511 488 ntTSL 2 BASIC9.9□□□□□ -0.82
SLC1A1P43005 AC009945.1-201ENST00000453188 298 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC9.9□□□□□ -0.82
SLC1A1P43005 SYNPR-AS1-201ENST00000488201 558 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC9.9□□□□□ -0.82
SLC1A1P43005 TDGF1P5-201ENST00000523009 453 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 IL22-202ENST00000538666 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 OR7E106P-201ENST00000556941 1021 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 AC015853.1-201ENST00000574008 592 ntTSL 3 BASIC9.9□□□□□ -0.82
SLC1A1P43005 MIR3663-201ENST00000583207 97 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 SKA2-207ENST00000583380 583 ntTSL 5 BASIC9.9□□□□□ -0.82
SLC1A1P43005 AC068473.2-201ENST00000587315 474 ntTSL 3 BASIC9.9□□□□□ -0.82
SLC1A1P43005 AC019322.3-201ENST00000616104 478 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 AL356585.1-201ENST00000624447 897 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
SLC1A1P43005 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 FAM71C-201ENST00000324341 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
SLC1A1P43005 AP003469.4-201ENST00000565617 2825 ntBASIC9.9□□□□□ -0.82
SLC1A1P43005 Z83847.1-201ENST00000569912 1463 ntBASIC9.9□□□□□ -0.83
SLC1A1P43005 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SLC1A1P43005 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 CD160-202ENST00000369288 1424 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
SLC1A1P43005 COMMD3-BMI1-205ENST00000602390 1419 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
SLC1A1P43005 GABRB3-203ENST00000400188 1900 ntTSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.9□□□□□ -0.83
SLC1A1P43005 AC022182.3-201ENST00000529239 2167 ntBASIC9.9□□□□□ -0.83
SLC1A1P43005 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 IL22RA2-202ENST00000339602 2620 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 C8orf46-201ENST00000305454 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 VNN3-204ENST00000414302 1312 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 AL021707.2-203ENST00000444381 1325 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 TRIO-224ENST00000620511 1547 ntTSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 LINC01702-201ENST00000230113 487 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 RN7SKP87-201ENST00000364096 301 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 PAGE1-201ENST00000376150 665 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 RNVU1-7-201ENST00000383858 164 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 IGLV8-61-201ENST00000390283 414 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AL929410.1-201ENST00000428250 154 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 PSMD10P1-201ENST00000436861 681 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 TMEM256P2-201ENST00000440241 341 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 NPM1P51-201ENST00000443470 744 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 AC068279.1-201ENST00000444323 888 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 LINC01598-202ENST00000445151 719 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC073336.1-201ENST00000448767 664 ntTSL 3 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AL683807.2-201ENST00000453953 548 ntTSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC9.89□□□□□ -0.83
SLC1A1P43005 MEF2C-AS1-206ENST00000511100 828 ntTSL 3 BASIC9.89□□□□□ -0.83
SLC1A1P43005 ENY2-208ENST00000520147 857 ntTSL 4 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC022679.1-201ENST00000522559 496 ntTSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC092123.1-201ENST00000565623 871 ntTSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC109460.2-202ENST00000568057 573 ntTSL 3 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC005323.1-201ENST00000579914 569 ntTSL 4 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC9.89□□□□□ -0.83
SLC1A1P43005 TMEM147-AS1-204ENST00000590125 698 ntTSL 3 BASIC9.89□□□□□ -0.83
SLC1A1P43005 LINC01440-203ENST00000596828 1005 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC005618.1-202ENST00000606674 544 ntTSL 4 BASIC9.89□□□□□ -0.83
SLC1A1P43005 AC136603.1-201ENST00000625152 767 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ZIK1P1-201ENST00000456074 1459 ntBASIC9.89□□□□□ -0.83
SLC1A1P43005 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 HLA-DOA-201ENST00000229829 3489 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
SLC1A1P43005 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
SLC1A1P43005 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC9.89□□□□□ -0.83
SLC1A1P43005 CLRN1-201ENST00000295911 1444 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms