Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 PTMA-201ENST00000341369 1212 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 TMEM59-203ENST00000371341 1116 ntTSL 2 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 IGHV1-58-201ENST00000390628 414 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AP001619.1-201ENST00000432411 447 ntTSL 3 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 WBP1LP6-201ENST00000438434 424 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC083939.1-201ENST00000445475 126 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC009800.1-201ENST00000511357 1006 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 S100Z-202ENST00000513010 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC104232.1-201ENST00000522106 875 ntTSL 3 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 LINGO1-AS1-203ENST00000560265 335 ntTSL 3 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 FTLP14-201ENST00000562087 484 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC005829.1-202ENST00000562555 298 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 PMM2-213ENST00000566983 907 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 HAR1B-202ENST00000608031 773 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC012594.1-253ENST00000609532 846 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 S100Z-203ENST00000613039 671 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 SPDYE20P-201ENST00000616891 632 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 NPIPB2-207ENST00000620285 1216 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC079336.6-201ENST00000624836 613 ntBASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC012594.1-214ENST00000630496 858 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 DMXL2-201ENST00000251076 10672 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 TBC1D14-202ENST00000410031 4201 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 PKNOX1-203ENST00000432907 5180 ntTSL 2 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 PAN2-209ENST00000548043 4641 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 TMBIM6-201ENST00000267115 2836 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 SPATA7-202ENST00000356583 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 TROVE2-204ENST00000367445 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 AL117192.1-202ENST00000557689 1990 ntTSL 2 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 SLFN11-201ENST00000308377 4910 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
LMO3Q8TAP4 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 SCNM1-202ENST00000368905 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC078846.1-201ENST00000608694 7083 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 ARNT-208ENST00000505755 2427 ntTSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 STK36-202ENST00000392105 4821 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 EXD2-203ENST00000409018 3252 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 CCDC88A-202ENST00000336838 9505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC096720.2-201ENST00000623308 2458 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC092375.2-201ENST00000567370 1665 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC009021.2-201ENST00000567401 1666 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 LINC01847-203ENST00000641163 1490 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 ZMAT3-201ENST00000311417 9406 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 BPIFA1-203ENST00000375422 1063 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 PADI4-202ENST00000375453 841 ntTSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 CSF2RA-203ENST00000381500 1283 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC079834.1-201ENST00000414016 421 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 RPSAP33-201ENST00000432315 865 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 PPP1R2P2-201ENST00000440405 613 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC007557.2-201ENST00000440900 583 ntTSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC020658.1-201ENST00000471253 938 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 TRAF3IP3-212ENST00000477431 791 ntTSL 3 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC048341.1-201ENST00000480482 403 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 SNORA33.3-201ENST00000516236 136 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC008663.3-201ENST00000520300 457 ntTSL 3 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC091144.2-201ENST00000521717 433 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC011632.1-201ENST00000523860 773 ntTSL 3 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 ST13P5-201ENST00000526214 1110 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AP001189.4-201ENST00000533588 452 ntTSL 3 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC106028.1-201ENST00000554322 526 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 OR4K16P-201ENST00000554603 969 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC087392.2-201ENST00000573877 585 ntTSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AP001005.2-201ENST00000575066 763 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 ZNF222-203ENST00000587846 537 ntTSL 4 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 TEX26-AS1-210ENST00000588726 841 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 BOLA2P2-202ENST00000604904 567 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AC012491.1-201ENST00000605674 799 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 RN7SL620P-201ENST00000610816 303 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 Metazoa_SRP.197-201ENST00000618956 303 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 MIR6744-201ENST00000619480 66 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 NRXN1-234ENST00000630656 837 ntTSL 5 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AL353625.1-201ENST00000569097 3131 ntBASIC10.07□□□□□ -0.8
LMO3Q8TAP4 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 XPNPEP2-202ENST00000371106 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 CD28-202ENST00000374481 4526 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
LMO3Q8TAP4 DIAPH3-204ENST00000400320 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms