Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 TRIM10-203ENST00000376704 3007 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 AL359547.1-201ENST00000419168 2190 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 SH3YL1-205ENST00000403712 1695 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 USP17L10-202ENST00000421288 1677 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 COMMD9-201ENST00000263401 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SYCE2Q6PIF2 MARS2-201ENST00000282276 3019 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 FGFR2-202ENST00000346997 2472 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 CLIP4-204ENST00000404424 2480 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 CYB561A3-202ENST00000426130 3205 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ALDH1L1-203ENST00000393434 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ZNF195-205ENST00000399602 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 PIEZO2-210ENST00000580640 8334 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 FLII-215ENST00000545457 3975 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ODF2-210ENST00000444119 2418 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 TMPRSS4-218ENST00000534111 5550 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 PROM2-202ENST00000317668 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AL031864.1-201ENST00000392075 423 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 MIR1306-201ENST00000408439 85 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 EIF3KP2-201ENST00000415266 626 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC092100.1-203ENST00000421513 653 ntTSL 3 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 IGKV1D-35-201ENST00000442736 271 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 RIIAD1-206ENST00000479191 449 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC090311.1-201ENST00000490739 249 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 PTPRG-AS1-209ENST00000495542 502 ntTSL 4 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ATOX1-202ENST00000520382 466 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ATOX1-205ENST00000522314 724 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 MTFR1L-215ENST00000524618 1217 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 NANOGP1-201ENST00000525030 915 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 NANOG-202ENST00000526286 870 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 NANOGP8-201ENST00000528386 918 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 OR7E5P-201ENST00000529916 706 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 NANOGP7-201ENST00000554450 918 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC006146.1-201ENST00000557304 693 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LINC02137-201ENST00000561906 644 ntTSL 3 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 TMEM170A-204ENST00000567796 734 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AC016629.3-201ENST00000596029 519 ntTSL 3 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 NANOGP8-202ENST00000629403 870 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 BUD13P1-201ENST00000603676 1489 ntBASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 RNF40-204ENST00000563683 4063 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 LINC01498-201ENST00000502160 2984 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 IKBKB-202ENST00000416505 4036 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 AMD1-201ENST00000368876 3040 ntTSL 5 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 ENTPD3-201ENST00000301825 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC10.01□□□□□ -0.81
SYCE2Q6PIF2 CHODL-205ENST00000400131 2036 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 TXNDC15-201ENST00000358387 3548 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 ALDH7A1-231ENST00000637206 2466 ntTSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 GOSR2-213ENST00000638216 3574 ntTSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 VIPR1-AS1-201ENST00000452639 1435 ntTSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 KLHL20-201ENST00000209884 3421 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 AC007405.1-201ENST00000442456 2149 ntTSL 2 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 FYN-229ENST00000538466 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 ZNF195-207ENST00000429541 2389 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 SELP-206ENST00000458599 1945 ntTSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 PNLIPRP1-201ENST00000358834 1497 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 SYNPO2-201ENST00000307142 7295 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 PTH-201ENST00000282091 813 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SYCE2Q6PIF2 TRBV11-1-201ENST00000390367 364 ntAPPRIS P1 BASIC10□□□□□ -0.81
SYCE2Q6PIF2 SNORA48.6-201ENST00000391156 130 ntBASIC10□□□□□ -0.81
SYCE2Q6PIF2 ZNF839P1-201ENST00000403487 861 ntBASIC10□□□□□ -0.81
SYCE2Q6PIF2 RN7SKP3-201ENST00000411409 358 ntBASIC10□□□□□ -0.81
SYCE2Q6PIF2 MYL6BP1-201ENST00000429485 615 ntBASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms