Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 IDI2-201ENST00000277517 1359 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 FAM189A2-203ENST00000377216 1385 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NECAP1-219ENST00000639811 2175 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC005863.1-201ENST00000379640 2998 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 IL6-204ENST00000404625 1527 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ZEB2-210ENST00000440875 1809 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ZNF649-207ENST00000600738 2283 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 TTC5-201ENST00000258821 4779 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 MTF2-213ENST00000540243 3845 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ATXN1L-201ENST00000427980 7886 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ERI3-202ENST00000372259 1332 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 CALD1-202ENST00000361901 4114 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ITGA10-204ENST00000539363 4735 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 LINC00941-201ENST00000547804 1645 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 FAM173B-201ENST00000280330 1928 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 TTC23-214ENST00000558663 2068 ntAPPRIS P2 TSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 BPNT1-203ENST00000414869 2357 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC009227.1-201ENST00000434635 2362 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 NLRP9P1-201ENST00000540920 2655 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC090559.2-201ENST00000366360 430 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 SLF2-203ENST00000370271 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 RNA5SP207-201ENST00000390874 107 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 FCAR-208ENST00000391726 609 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AL355864.1-201ENST00000401937 526 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC064847.1-201ENST00000403125 506 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AL512306.3-201ENST00000453895 683 ntTSL 3 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ID2-AS1-207ENST00000455965 794 ntTSL 4 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AL355497.2-201ENST00000456346 880 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 RPL32P3-205ENST00000507287 1555 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 BTNL8-207ENST00000511704 1260 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 RNA5SP411-201ENST00000516136 114 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 WBP1LP10-201ENST00000519787 364 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC018653.1-202ENST00000545794 490 ntTSL 3 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ARL1-210ENST00000551688 470 ntTSL 4 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AL049839.2-201ENST00000553947 3067 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC104564.4-201ENST00000579050 465 ntTSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 RN7SL498P-201ENST00000583650 298 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC005580.1-203ENST00000591926 503 ntTSL 4 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 RN7SL185P-201ENST00000615150 249 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 DPP6-216ENST00000619756 1109 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AC102945.2-201ENST00000623026 1422 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 AL035660.2-202ENST00000641233 242 ntBASIC8.84□□□□□ -0.99
SNX18Q96RF0 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ZFYVE26-209ENST00000557306 1533 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 FAM49A-202ENST00000406434 1386 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 CD3G-206ENST00000532917 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SNX18Q96RF0 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
SNX18Q96RF0 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.84□□□□□ -1
SNX18Q96RF0 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
SNX18Q96RF0 COL21A1-201ENST00000244728 4339 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -1
SNX18Q96RF0 PLS1-202ENST00000457734 3706 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 PTK2B-201ENST00000346049 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 SGK1-203ENST00000367857 2414 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 LIN54-203ENST00000446851 4083 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC8.83□□□□□ -1
SNX18Q96RF0 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 TESK2-201ENST00000372084 2600 ntTSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 PCP4-201ENST00000328619 660 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 KRTAP21-1-201ENST00000335093 599 ntAPPRIS P1 BASIC8.83□□□□□ -1
SNX18Q96RF0 RNU1-34P-201ENST00000364421 157 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 XCL2-201ENST00000367819 565 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SNX18Q96RF0 SHC3-201ENST00000375831 569 ntTSL 2 BASIC8.83□□□□□ -1
SNX18Q96RF0 RNVU1-17-201ENST00000384619 164 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 MIR197-201ENST00000384976 75 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AL137792.1-201ENST00000399029 557 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 POU6F2-AS2-201ENST00000420243 514 ntTSL 5 BASIC8.83□□□□□ -1
SNX18Q96RF0 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC8.83□□□□□ -1
SNX18Q96RF0 RN7SL364P-201ENST00000473668 272 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 RN7SL679P-201ENST00000497096 304 ntBASIC8.83□□□□□ -1
SNX18Q96RF0 AC098680.1-201ENST00000506010 367 ntTSL 3 BASIC8.83□□□□□ -1
SNX18Q96RF0 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC8.83□□□□□ -1
SNX18Q96RF0 THAP6-210ENST00000507557 542 ntTSL 4 BASIC8.83□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms