Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 AC011767.1-201ENST00000617410 1153 ntBASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
DDX49Q9Y6V7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
DDX49Q9Y6V7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
DDX49Q9Y6V7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 AC007952.6-201ENST00000573168 2673 ntBASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 AC003957.1-201ENST00000625108 2673 ntBASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
DDX49Q9Y6V7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 AC079140.4-201ENST00000507448 529 ntBASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
DDX49Q9Y6V7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
DDX49Q9Y6V7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.64■■□□□ 1.54
DDX49Q9Y6V7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms