Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 AC104771.1-201ENST00000603335 964 ntBASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPH3AQ9Y2J0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 AC231657.2-201ENST00000624556 255 ntBASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPH3AQ9Y2J0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 MIR663A-201ENST00000385250 93 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 AC006970.2-201ENST00000450065 779 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 AC245052.3-201ENST00000450182 901 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 AC013268.1-206ENST00000638368 961 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 AC112229.1-201ENST00000639295 961 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 RBM17P2-201ENST00000616397 1405 ntBASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RPH3AQ9Y2J0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPH3AQ9Y2J0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 CNN2P6-201ENST00000439038 900 ntBASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.89■□□□□ 0.61
RPH3AQ9Y2J0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 CROCCP5-201ENST00000436658 830 ntBASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 AC005181.1-201ENST00000604782 1256 ntBASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPH3AQ9Y2J0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RPH3AQ9Y2J0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RPH3AQ9Y2J0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms