Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 TSPY6P-201ENST00000448518 926 ntBASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 CDV3P1-201ENST00000471403 739 ntBASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPHK1Q9NYA1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 AC007322.3-201ENST00000426526 701 ntBASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 AC116050.2-201ENST00000612102 1779 ntBASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPHK1Q9NYA1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 FAM21FP-204ENST00000608637 956 ntBASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPHK1Q9NYA1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.93■□□□□ 0.78
SPHK1Q9NYA1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 AC005229.4-201ENST00000610085 2198 ntBASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 MKRN4P-201ENST00000444706 1521 ntBASIC19.92■□□□□ 0.78
SPHK1Q9NYA1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AL355802.2-201ENST00000402069 882 ntBASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AL512625.2-201ENST00000417533 625 ntBASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AL138781.1-201ENST00000566567 1274 ntBASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AC010980.2-201ENST00000587099 1412 ntBASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPHK1Q9NYA1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 SLC29A4P1-201ENST00000398760 971 ntBASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SPHK1Q9NYA1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms