Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
THUMPD1Q9NXG2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.4■□□□□ 0.7
THUMPD1Q9NXG2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
THUMPD1Q9NXG2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.39■□□□□ 0.7
THUMPD1Q9NXG2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
THUMPD1Q9NXG2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
THUMPD1Q9NXG2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 AC142381.2-201ENST00000566120 298 ntBASIC19.38■□□□□ 0.69
THUMPD1Q9NXG2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 KRT87P-202ENST00000534226 1464 ntBASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 AC079140.4-201ENST00000507448 529 ntBASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 AC011484.1-201ENST00000377652 1995 ntBASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
THUMPD1Q9NXG2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
THUMPD1Q9NXG2 AL391422.3-201ENST00000603791 2761 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms