Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX15Q9NRS6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX15Q9NRS6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNX15Q9NRS6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX15Q9NRS6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 PCDHAC2-203ENST00000615316 3011 ntBASIC20.54■□□□□ 0.88
SNX15Q9NRS6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.54■□□□□ 0.88
SNX15Q9NRS6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 AL354811.1-201ENST00000610286 706 ntBASIC20.54■□□□□ 0.88
SNX15Q9NRS6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX15Q9NRS6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 AL512408.1-201ENST00000569378 2000 ntBASIC20.53■□□□□ 0.88
SNX15Q9NRS6 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX15Q9NRS6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 SUDS3P1-201ENST00000505831 966 ntBASIC20.52■□□□□ 0.88
SNX15Q9NRS6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX15Q9NRS6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX15Q9NRS6 AL162377.1-201ENST00000618844 1793 ntBASIC20.51■□□□□ 0.87
SNX15Q9NRS6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX15Q9NRS6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms