Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 TERF1P5-201ENST00000477545 1207 ntBASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN4Q9NRR5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 AC091799.1-201ENST00000422823 811 ntBASIC19■□□□□ 0.63
UBQLN4Q9NRR5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN4Q9NRR5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN4Q9NRR5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 MFSD11-216ENST00000590393 1141 ntBASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBQLN4Q9NRR5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 BID-214ENST00000617586 542 ntTSL 5 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 AC013268.1-206ENST00000638368 961 ntBASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 AC112229.1-201ENST00000639295 961 ntBASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBQLN4Q9NRR5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
UBQLN4Q9NRR5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms