Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SMCO4Q9NRQ5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 AC131274.2-201ENST00000580697 1507 ntBASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 AL512408.1-201ENST00000569378 2000 ntBASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SMCO4Q9NRQ5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SMCO4Q9NRQ5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.19
SMCO4Q9NRQ5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
SMCO4Q9NRQ5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.27■□□□□ 0.19
SMCO4Q9NRQ5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SMCO4Q9NRQ5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMCO4Q9NRQ5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 AC005332.7-201ENST00000614046 2005 ntBASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMCO4Q9NRQ5 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 PLK5-205ENST00000642079 1969 ntBASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMCO4Q9NRQ5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SMCO4Q9NRQ5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms