Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 LINC01006-201ENST00000333319 2292 ntBASIC19.77■□□□□ 0.76
BRF2Q9HAW0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 AC243732.1-201ENST00000612648 864 ntBASIC19.77■□□□□ 0.76
BRF2Q9HAW0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRF2Q9HAW0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 AC116050.2-201ENST00000612102 1779 ntBASIC19.76■□□□□ 0.75
BRF2Q9HAW0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.76■□□□□ 0.75
BRF2Q9HAW0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 AC073314.1-201ENST00000568729 2216 ntBASIC19.75■□□□□ 0.75
BRF2Q9HAW0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRF2Q9HAW0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 FP700111.2-201ENST00000619190 1892 ntBASIC19.74■□□□□ 0.75
BRF2Q9HAW0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRF2Q9HAW0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 AC027702.1-201ENST00000563810 1770 ntBASIC19.73■□□□□ 0.75
BRF2Q9HAW0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 AC097381.1-201ENST00000429019 1296 ntBASIC19.73■□□□□ 0.75
BRF2Q9HAW0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 RBM17P2-201ENST00000616397 1405 ntBASIC19.73■□□□□ 0.75
BRF2Q9HAW0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
BRF2Q9HAW0 AC019069.1-201ENST00000610008 1333 ntBASIC19.73■□□□□ 0.75
BRF2Q9HAW0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms