Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCNX3Q9H6A9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 AL162412.1-201ENST00000567129 965 ntBASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 PLK5-205ENST00000642079 1969 ntBASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCNX3Q9H6A9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 AC007322.1-201ENST00000426983 750 ntBASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCNX3Q9H6A9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCNX3Q9H6A9 AL157384.1-201ENST00000445995 2473 ntBASIC18.77■□□□□ 0.59
PCNX3Q9H6A9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PCNX3Q9H6A9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.77■□□□□ 0.59
PCNX3Q9H6A9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 GUSBP6-202ENST00000438529 1198 ntBASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCNX3Q9H6A9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCNX3Q9H6A9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 AC098934.4-201ENST00000564127 592 ntBASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 AL356652.1-201ENST00000615962 565 ntBASIC18.74■□□□□ 0.59
PCNX3Q9H6A9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms