Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
PCDH11YQ9BZA8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
PCDH11YQ9BZA8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC27.03■■□□□ 1.92
PCDH11YQ9BZA8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 AC012618.2-201ENST00000428058 849 ntBASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC27.02■■□□□ 1.92
PCDH11YQ9BZA8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.92
PCDH11YQ9BZA8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PCDH11YQ9BZA8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 MTDHP1-201ENST00000605323 784 ntBASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC27■■□□□ 1.91
PCDH11YQ9BZA8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDH11YQ9BZA8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 AC233702.5-201ENST00000584107 538 ntBASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDH11YQ9BZA8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDH11YQ9BZA8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDH11YQ9BZA8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
PCDH11YQ9BZA8 ECEL1P3-201ENST00000427961 737 ntBASIC26.97■■□□□ 1.91
PCDH11YQ9BZA8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms