Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC107081.1-201ENST00000414975 361 ntBASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 RAD23BP2-201ENST00000416003 1207 ntBASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 MTCO2P21-201ENST00000419780 677 ntBASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC017091.1-201ENST00000513551 1061 ntTSL 5 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC015540.1-201ENST00000615828 501 ntBASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 AC104985.3-201ENST00000623479 597 ntBASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 PIGA-209ENST00000634582 965 ntTSL 2 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC12.71□□□□□ -0.37
KRTAP3-3Q9BYR6 OR6B2-201ENST00000402971 1492 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
KRTAP3-3Q9BYR6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC12.71□□□□□ -0.38
KRTAP3-3Q9BYR6 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KRTAP3-3Q9BYR6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 SDAD1P4-201ENST00000418445 1645 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AL031282.1-204ENST00000418950 497 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AL355493.1-201ENST00000422707 808 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 RPS7P10-201ENST00000464254 603 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC008565.1-201ENST00000509046 885 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 BNIP3P19-201ENST00000605397 577 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC099552.4-201ENST00000624248 949 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AC017037.3-201ENST00000625016 472 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 AL078582.1-201ENST00000641922 511 ntBASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC12.7□□□□□ -0.38
KRTAP3-3Q9BYR6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AL663109.1-201ENST00000411498 844 ntBASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC009495.1-201ENST00000428888 372 ntTSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC00370-201ENST00000455487 698 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 PDLIM5-208ENST00000504489 538 ntTSL 4 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AP003717.2-201ENST00000534962 898 ntBASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC103740.2-201ENST00000557900 1225 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC009166.1-201ENST00000570060 487 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 NAA60-220ENST00000573580 758 ntTSL 4 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 ZNF93-205ENST00000591366 590 ntTSL 3 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC005034.5-201ENST00000604219 466 ntBASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AC012409.3-201ENST00000611343 981 ntBASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
KRTAP3-3Q9BYR6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 BX255925.1-201ENST00000566954 1854 ntBASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
KRTAP3-3Q9BYR6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms