RNA–Protein interactions for RNA: ENST00000439454.2

LINC00376-201, long intergenic non-protein coding RNA 376, humanhuman

TSL 5 BASIC

Gene LINC00376, Length 693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00376-201ENST00000439454 AEBP2Q6ZN18 517 aaPredicted RBP28.88■■■□□ 2.21
LINC00376-201ENST00000439454 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
LINC00376-201ENST00000439454 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
LINC00376-201ENST00000439454 PHF23Q9BUL5 403 aaPredicted RBP24.31■■□□□ 1.48
LINC00376-201ENST00000439454 FOXD1Q16676 465 aa22.85■■□□□ 1.25
LINC00376-201ENST00000439454 PLPPR3Q6T4P5 718 aa22.1■■□□□ 1.13
LINC00376-201ENST00000439454 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
LINC00376-201ENST00000439454 ADRA2BP18089 450 aa21.56■■□□□ 1.04
LINC00376-201ENST00000439454 PIAS4Q8N2W9 510 aaPredicted RBP21.35■■□□□ 1.01
LINC00376-201ENST00000439454 MSH5O43196 834 aa21.13■□□□□ 0.97
LINC00376-201ENST00000439454 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
LINC00376-201ENST00000439454 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
LINC00376-201ENST00000439454 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
LINC00376-201ENST00000439454 PPP4R3CPQ6ZMV5 832 aa19.47■□□□□ 0.71
LINC00376-201ENST00000439454 DMRT2Q9Y5R5 561 aa19.45■□□□□ 0.7
LINC00376-201ENST00000439454 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
LINC00376-201ENST00000439454 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
LINC00376-201ENST00000439454 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
LINC00376-201ENST00000439454 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
LINC00376-201ENST00000439454 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
LINC00376-201ENST00000439454 NPM3O75607 178 aaKnown RBP18.56■□□□□ 0.56
LINC00376-201ENST00000439454 KCNA4P22459 653 aa18.48■□□□□ 0.55
LINC00376-201ENST00000439454 RNF39Q9H2S5 420 aa18.14■□□□□ 0.49
LINC00376-201ENST00000439454 DNAJC5BQ9UF47 199 aa18.04■□□□□ 0.48
LINC00376-201ENST00000439454 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
LINC00376-201ENST00000439454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
LINC00376-201ENST00000439454 C1QBPQ07021 282 aaKnown RBP17.82■□□□□ 0.44
LINC00376-201ENST00000439454 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
LINC00376-201ENST00000439454 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
LINC00376-201ENST00000439454 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
LINC00376-201ENST00000439454 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
LINC00376-201ENST00000439454 CAPN15O75808 1086 aa17.22■□□□□ 0.35
LINC00376-201ENST00000439454 DSG3P32926 999 aa17.1■□□□□ 0.33
LINC00376-201ENST00000439454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
LINC00376-201ENST00000439454 MYCNP04198 464 aaPredicted RBP17.07■□□□□ 0.32
LINC00376-201ENST00000439454 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
LINC00376-201ENST00000439454 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
LINC00376-201ENST00000439454 ZBTB22O15209 634 aa17.05■□□□□ 0.32
LINC00376-201ENST00000439454 TRHP20396 242 aaPredicted RBP17.04■□□□□ 0.32
LINC00376-201ENST00000439454 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
LINC00376-201ENST00000439454 APLP2Q06481 763 aa16.97■□□□□ 0.31
LINC00376-201ENST00000439454 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
LINC00376-201ENST00000439454 ABCB7O75027 752 aa16.91■□□□□ 0.3
LINC00376-201ENST00000439454 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
LINC00376-201ENST00000439454 POLA2Q14181 598 aa16.66■□□□□ 0.26
LINC00376-201ENST00000439454 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
LINC00376-201ENST00000439454 ATXN8OSP0DMR3 200 aa16.46■□□□□ 0.23
LINC00376-201ENST00000439454 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
LINC00376-201ENST00000439454 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
LINC00376-201ENST00000439454 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
LINC00376-201ENST00000439454 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
LINC00376-201ENST00000439454 MKRN4PQ13434 485 aaPredicted RBP16.04■□□□□ 0.16
LINC00376-201ENST00000439454 FBLN2P98095 1184 aa15.95■□□□□ 0.14
LINC00376-201ENST00000439454 POTEHQ6S545 545 aa15.92■□□□□ 0.14
LINC00376-201ENST00000439454 AKT1S1Q96B36 256 aa15.91■□□□□ 0.14
LINC00376-201ENST00000439454 REM2Q8IYK8 340 aaPredicted RBP15.83■□□□□ 0.12
LINC00376-201ENST00000439454 CHRDL2Q6WN34 429 aa15.81■□□□□ 0.12
LINC00376-201ENST00000439454 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
LINC00376-201ENST00000439454 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
LINC00376-201ENST00000439454 SPDYE2Q495Y8 402 aa15.77■□□□□ 0.12
LINC00376-201ENST00000439454 PITPNM1O00562 1244 aa15.67■□□□□ 0.1
LINC00376-201ENST00000439454 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
LINC00376-201ENST00000439454 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
LINC00376-201ENST00000439454 PIP4P2Q8N4L2 257 aa15.53■□□□□ 0.08
LINC00376-201ENST00000439454 PABPN1Q86U42 306 aaKnown RBP eCLIP15.47■□□□□ 0.07
LINC00376-201ENST00000439454 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00376-201ENST00000439454 CLEC11AQ9Y240 323 aa15.45■□□□□ 0.06
LINC00376-201ENST00000439454 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
LINC00376-201ENST00000439454 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
LINC00376-201ENST00000439454 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
LINC00376-201ENST00000439454 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
LINC00376-201ENST00000439454 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
LINC00376-201ENST00000439454 HAX1O00165 279 aa15.14■□□□□ 0.01
LINC00376-201ENST00000439454 EVX2Q03828 476 aa15.11■□□□□ 0.01
LINC00376-201ENST00000439454 SP7Q8TDD2 431 aaPredicted RBP15.03■□□□□ -0
LINC00376-201ENST00000439454 PROM2Q8N271 834 aa15.02■□□□□ -0
LINC00376-201ENST00000439454 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
LINC00376-201ENST00000439454 CREBZFQ9NS37 354 aa14.96□□□□□ -0.01
LINC00376-201ENST00000439454 C19orf67A6NJJ6 358 aa14.95□□□□□ -0.02
LINC00376-201ENST00000439454 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
LINC00376-201ENST00000439454 FKBP8Q14318 412 aa14.87□□□□□ -0.03
LINC00376-201ENST00000439454 MNX1P50219 401 aaPredicted RBP14.77□□□□□ -0.05
LINC00376-201ENST00000439454 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
LINC00376-201ENST00000439454 GABBR2O75899 941 aa14.69□□□□□ -0.06
LINC00376-201ENST00000439454 ZRANB1Q9UGI0 708 aa14.61□□□□□ -0.07
LINC00376-201ENST00000439454 MIER1Q8N108 512 aa14.59□□□□□ -0.07
LINC00376-201ENST00000439454 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
LINC00376-201ENST00000439454 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
LINC00376-201ENST00000439454 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
LINC00376-201ENST00000439454 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
LINC00376-201ENST00000439454 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
LINC00376-201ENST00000439454 PAK3O75914 559 aaPredicted RBP14.43□□□□□ -0.1
LINC00376-201ENST00000439454 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
LINC00376-201ENST00000439454 GALR2O43603 387 aaPredicted RBP14.41□□□□□ -0.1
LINC00376-201ENST00000439454 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
LINC00376-201ENST00000439454 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
LINC00376-201ENST00000439454 CLCN6P51797 869 aa14.37□□□□□ -0.11
LINC00376-201ENST00000439454 FBXO3Q9UK99 471 aa14.36□□□□□ -0.11
LINC00376-201ENST00000439454 CCDC61Q9Y6R9 512 aa14.34□□□□□ -0.11
LINC00376-201ENST00000439454 NUBP1P53384 320 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 1375.7 ms