RNA–Protein interactions for RNA: ENST00000416350.1

AC104777.3-201, humanhuman

TSL 3 BASIC

Gene AC104777.3, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104777.3-201ENST00000416350 AEBP2Q6ZN18 517 aaPredicted RBP28.77■■■□□ 2.2
AC104777.3-201ENST00000416350 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
AC104777.3-201ENST00000416350 SENP3Q9H4L4 574 aaPredicted RBP24.53■■□□□ 1.52
AC104777.3-201ENST00000416350 PHF23Q9BUL5 403 aaPredicted RBP24.22■■□□□ 1.47
AC104777.3-201ENST00000416350 FOXD1Q16676 465 aa22.82■■□□□ 1.24
AC104777.3-201ENST00000416350 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
AC104777.3-201ENST00000416350 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
AC104777.3-201ENST00000416350 ADRA2BP18089 450 aa21.42■■□□□ 1.02
AC104777.3-201ENST00000416350 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
AC104777.3-201ENST00000416350 MSH5O43196 834 aa21.3■■□□□ 1
AC104777.3-201ENST00000416350 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
AC104777.3-201ENST00000416350 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
AC104777.3-201ENST00000416350 MAPK8IP2Q13387 824 aaPredicted RBP19.6■□□□□ 0.73
AC104777.3-201ENST00000416350 DMRT2Q9Y5R5 561 aa19.49■□□□□ 0.71
AC104777.3-201ENST00000416350 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
AC104777.3-201ENST00000416350 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
AC104777.3-201ENST00000416350 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
AC104777.3-201ENST00000416350 RNF216Q9NWF9 866 aaPredicted RBP18.75■□□□□ 0.59
AC104777.3-201ENST00000416350 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
AC104777.3-201ENST00000416350 DCAF8L1A6NGE4 600 aa18.64■□□□□ 0.57
AC104777.3-201ENST00000416350 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
AC104777.3-201ENST00000416350 KCNA4P22459 653 aa18.24■□□□□ 0.51
AC104777.3-201ENST00000416350 RNF39Q9H2S5 420 aa18.19■□□□□ 0.5
AC104777.3-201ENST00000416350 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
AC104777.3-201ENST00000416350 CACNB1Q02641 598 aaPredicted RBP18.14■□□□□ 0.49
AC104777.3-201ENST00000416350 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
AC104777.3-201ENST00000416350 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.94■□□□□ 0.46
AC104777.3-201ENST00000416350 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
AC104777.3-201ENST00000416350 SLC4A2P04920 1241 aa17.54■□□□□ 0.4
AC104777.3-201ENST00000416350 SPINK5Q9NQ38 1064 aaPredicted RBP17.27■□□□□ 0.36
AC104777.3-201ENST00000416350 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
AC104777.3-201ENST00000416350 CAPN15O75808 1086 aa17.23■□□□□ 0.35
AC104777.3-201ENST00000416350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
AC104777.3-201ENST00000416350 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
AC104777.3-201ENST00000416350 APLP2Q06481 763 aa17.14■□□□□ 0.33
AC104777.3-201ENST00000416350 DSG3P32926 999 aa17.1■□□□□ 0.33
AC104777.3-201ENST00000416350 SAMD1Q6SPF0 538 aaPredicted RBP17.08■□□□□ 0.32
AC104777.3-201ENST00000416350 MYCNP04198 464 aaPredicted RBP17.05■□□□□ 0.32
AC104777.3-201ENST00000416350 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
AC104777.3-201ENST00000416350 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
AC104777.3-201ENST00000416350 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
AC104777.3-201ENST00000416350 ABCB7O75027 752 aa16.85■□□□□ 0.29
AC104777.3-201ENST00000416350 ZBTB22O15209 634 aa16.77■□□□□ 0.28
AC104777.3-201ENST00000416350 ATF5Q9Y2D1 282 aaPredicted RBP16.61■□□□□ 0.25
AC104777.3-201ENST00000416350 POLA2Q14181 598 aa16.58■□□□□ 0.24
AC104777.3-201ENST00000416350 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
AC104777.3-201ENST00000416350 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
AC104777.3-201ENST00000416350 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
AC104777.3-201ENST00000416350 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
AC104777.3-201ENST00000416350 POTEHQ6S545 545 aa16.07■□□□□ 0.16
AC104777.3-201ENST00000416350 OSCARQ8IYS5 282 aa16.07■□□□□ 0.16
AC104777.3-201ENST00000416350 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
AC104777.3-201ENST00000416350 AKT1S1Q96B36 256 aa15.99■□□□□ 0.15
AC104777.3-201ENST00000416350 FBLN2P98095 1184 aa15.96■□□□□ 0.15
AC104777.3-201ENST00000416350 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
AC104777.3-201ENST00000416350 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
AC104777.3-201ENST00000416350 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
AC104777.3-201ENST00000416350 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
AC104777.3-201ENST00000416350 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
AC104777.3-201ENST00000416350 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
AC104777.3-201ENST00000416350 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
AC104777.3-201ENST00000416350 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
AC104777.3-201ENST00000416350 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
AC104777.3-201ENST00000416350 PIP4P2Q8N4L2 257 aa15.55■□□□□ 0.08
AC104777.3-201ENST00000416350 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
AC104777.3-201ENST00000416350 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
AC104777.3-201ENST00000416350 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
AC104777.3-201ENST00000416350 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
AC104777.3-201ENST00000416350 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
AC104777.3-201ENST00000416350 SPDYE4A6NLX3 237 aa15.22■□□□□ 0.03
AC104777.3-201ENST00000416350 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
AC104777.3-201ENST00000416350 HAX1O00165 279 aa15.18■□□□□ 0.02
AC104777.3-201ENST00000416350 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
AC104777.3-201ENST00000416350 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
AC104777.3-201ENST00000416350 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
AC104777.3-201ENST00000416350 EVX2Q03828 476 aa15.01□□□□□ -0.01
AC104777.3-201ENST00000416350 C19orf67A6NJJ6 358 aa14.98□□□□□ -0.01
AC104777.3-201ENST00000416350 PROM2Q8N271 834 aa14.91□□□□□ -0.02
AC104777.3-201ENST00000416350 FARP1Q9Y4F1 1045 aaPredicted RBP14.91□□□□□ -0.02
AC104777.3-201ENST00000416350 CREBZFQ9NS37 354 aa14.88□□□□□ -0.03
AC104777.3-201ENST00000416350 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
AC104777.3-201ENST00000416350 GABBR2O75899 941 aa14.7□□□□□ -0.06
AC104777.3-201ENST00000416350 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
AC104777.3-201ENST00000416350 FKBP8Q14318 412 aa14.65□□□□□ -0.06
AC104777.3-201ENST00000416350 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
AC104777.3-201ENST00000416350 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
AC104777.3-201ENST00000416350 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
AC104777.3-201ENST00000416350 CLCN6P51797 869 aa14.56□□□□□ -0.08
AC104777.3-201ENST00000416350 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
AC104777.3-201ENST00000416350 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
AC104777.3-201ENST00000416350 MIER1Q8N108 512 aa14.47□□□□□ -0.09
AC104777.3-201ENST00000416350 PHF12Q96QT6 1004 aa14.41□□□□□ -0.1
AC104777.3-201ENST00000416350 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
AC104777.3-201ENST00000416350 POTEIP0CG38 1075 aa14.38□□□□□ -0.11
AC104777.3-201ENST00000416350 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
AC104777.3-201ENST00000416350 DCBLD2Q96PD2 775 aa14.34□□□□□ -0.11
AC104777.3-201ENST00000416350 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
AC104777.3-201ENST00000416350 FBXO3Q9UK99 471 aa14.31□□□□□ -0.12
AC104777.3-201ENST00000416350 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
AC104777.3-201ENST00000416350 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms