Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM62Q9BVG3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM62Q9BVG3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM62Q9BVG3 CROCCP5-201ENST00000436658 830 ntBASIC21.58■■□□□ 1.05
TRIM62Q9BVG3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM62Q9BVG3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM62Q9BVG3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM62Q9BVG3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.58■■□□□ 1.04
TRIM62Q9BVG3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM62Q9BVG3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM62Q9BVG3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 AC100791.3-201ENST00000617619 330 ntBASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM62Q9BVG3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 AL512625.2-201ENST00000417533 625 ntBASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
TRIM62Q9BVG3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 AC121338.2-201ENST00000622535 1744 ntBASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
TRIM62Q9BVG3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 PGM5P4-201ENST00000421970 445 ntBASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 AF201337.1-201ENST00000520239 748 ntBASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 AC016405.3-201ENST00000607710 860 ntBASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 AL121832.2-201ENST00000610979 668 ntBASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM62Q9BVG3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 NCF1B-203ENST00000435988 1254 ntBASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM62Q9BVG3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms