Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.79□□□□□ -0.2
LITAFQ99732 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.79□□□□□ -0.2
LITAFQ99732 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.79□□□□□ -0.2
LITAFQ99732 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC13.79□□□□□ -0.2
LITAFQ99732 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LITAFQ99732 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC13.79□□□□□ -0.2
LITAFQ99732 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LITAFQ99732 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.78□□□□□ -0.2
LITAFQ99732 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.78□□□□□ -0.2
LITAFQ99732 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 AC093503.3-201ENST00000624917 2352 ntBASIC13.78□□□□□ -0.2
LITAFQ99732 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LITAFQ99732 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.78□□□□□ -0.2
LITAFQ99732 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.78□□□□□ -0.2
LITAFQ99732 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC13.78□□□□□ -0.2
LITAFQ99732 Z92544.1-202ENST00000571933 1220 ntBASIC13.78□□□□□ -0.2
LITAFQ99732 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LITAFQ99732 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC13.78□□□□□ -0.2
LITAFQ99732 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LITAFQ99732 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LITAFQ99732 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LITAFQ99732 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
LITAFQ99732 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LITAFQ99732 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LITAFQ99732 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LITAFQ99732 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LITAFQ99732 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.77□□□□□ -0.2
LITAFQ99732 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
LITAFQ99732 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LITAFQ99732 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LITAFQ99732 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.77□□□□□ -0.21
LITAFQ99732 AC005082.1-201ENST00000413042 2259 ntBASIC13.77□□□□□ -0.21
LITAFQ99732 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.77□□□□□ -0.21
LITAFQ99732 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.77□□□□□ -0.21
LITAFQ99732 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC13.77□□□□□ -0.21
LITAFQ99732 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 AL451085.2-201ENST00000605085 799 ntBASIC13.77□□□□□ -0.21
LITAFQ99732 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.77□□□□□ -0.21
LITAFQ99732 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.77□□□□□ -0.21
LITAFQ99732 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LITAFQ99732 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LITAFQ99732 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.76□□□□□ -0.21
LITAFQ99732 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 AC133637.1-201ENST00000624115 1537 ntBASIC13.76□□□□□ -0.21
LITAFQ99732 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 DUX4L18-201ENST00000553347 1267 ntBASIC13.76□□□□□ -0.21
LITAFQ99732 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.76□□□□□ -0.21
LITAFQ99732 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.76□□□□□ -0.21
LITAFQ99732 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
LITAFQ99732 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.76□□□□□ -0.21
LITAFQ99732 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LITAFQ99732 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC13.76□□□□□ -0.21
LITAFQ99732 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.76□□□□□ -0.21
LITAFQ99732 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.76□□□□□ -0.21
LITAFQ99732 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.76□□□□□ -0.21
LITAFQ99732 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LITAFQ99732 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms