Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRGV9Q99603 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.11■□□□□ 0.17
TRGV9Q99603 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.11■□□□□ 0.17
TRGV9Q99603 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.11■□□□□ 0.17
TRGV9Q99603 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TRGV9Q99603 AC131212.1-201ENST00000613771 668 ntBASIC16.11■□□□□ 0.17
TRGV9Q99603 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRGV9Q99603 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRGV9Q99603 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV9Q99603 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.11■□□□□ 0.17
TRGV9Q99603 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
TRGV9Q99603 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRGV9Q99603 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRGV9Q99603 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRGV9Q99603 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 AC061975.6-201ENST00000579045 1553 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV9Q99603 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 AC096631.2-201ENST00000436136 790 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.1■□□□□ 0.17
TRGV9Q99603 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 AC012414.1-201ENST00000556676 535 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV9Q99603 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.1■□□□□ 0.17
TRGV9Q99603 AC008175.2-201ENST00000612840 297 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 AL355001.2-201ENST00000620617 1191 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRGV9Q99603 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.1■□□□□ 0.17
TRGV9Q99603 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 AC008406.3-201ENST00000620001 1374 ntBASIC16.1■□□□□ 0.17
TRGV9Q99603 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.1■□□□□ 0.17
TRGV9Q99603 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRGV9Q99603 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.1■□□□□ 0.17
TRGV9Q99603 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRGV9Q99603 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRGV9Q99603 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRGV9Q99603 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRGV9Q99603 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRGV9Q99603 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 AL162377.1-201ENST00000618844 1793 ntBASIC16.09■□□□□ 0.17
TRGV9Q99603 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV9Q99603 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRGV9Q99603 POU5F1P4-201ENST00000413175 1085 ntBASIC16.09■□□□□ 0.17
TRGV9Q99603 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.09■□□□□ 0.17
TRGV9Q99603 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV9Q99603 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.09■□□□□ 0.17
TRGV9Q99603 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.09■□□□□ 0.17
TRGV9Q99603 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRGV9Q99603 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV9Q99603 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV9Q99603 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.09■□□□□ 0.17
TRGV9Q99603 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRGV9Q99603 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.08■□□□□ 0.17
TRGV9Q99603 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRGV9Q99603 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV9Q99603 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV9Q99603 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV9Q99603 AC091305.1-201ENST00000479476 895 ntBASIC16.08■□□□□ 0.16
TRGV9Q99603 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV9Q99603 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.08■□□□□ 0.16
TRGV9Q99603 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV9Q99603 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRGV9Q99603 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms