Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 CYP2T3P-201ENST00000601990 817 ntBASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDK5RAP1Q96SZ6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 AC079834.2-201ENST00000609776 1949 ntBASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 LSM12P1-201ENST00000411836 588 ntBASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 AL589743.5-201ENST00000616611 1050 ntBASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CDK5RAP1Q96SZ6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 PGM5P4-201ENST00000421970 445 ntBASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.47■■□□□ 1.03
CDK5RAP1Q96SZ6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDK5RAP1Q96SZ6 CYP21A1P-202ENST00000354927 1481 ntBASIC21.45■■□□□ 1.03
CDK5RAP1Q96SZ6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 KRT18P68-201ENST00000392293 1000 ntBASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.45■■□□□ 1.02
CDK5RAP1Q96SZ6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms