Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRRC39Q96DD0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
LRRC39Q96DD0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 AC079140.4-201ENST00000507448 529 ntBASIC20.87■□□□□ 0.93
LRRC39Q96DD0 AC138907.5-202ENST00000569484 235 ntBASIC20.87■□□□□ 0.93
LRRC39Q96DD0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRRC39Q96DD0 KRT16P2-201ENST00000414673 1423 ntBASIC20.87■□□□□ 0.93
LRRC39Q96DD0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRRC39Q96DD0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 RARRES2P11-201ENST00000635158 484 ntBASIC20.85■□□□□ 0.93
LRRC39Q96DD0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRC39Q96DD0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRC39Q96DD0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 AC245052.3-201ENST00000450182 901 ntBASIC20.83■□□□□ 0.93
LRRC39Q96DD0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
LRRC39Q96DD0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms