Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
APH1AQ96BI3 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
APH1AQ96BI3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
APH1AQ96BI3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.32■□□□□ 0.52
APH1AQ96BI3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APH1AQ96BI3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.32■□□□□ 0.52
APH1AQ96BI3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 AL050303.2-201ENST00000619798 666 ntBASIC18.31■□□□□ 0.52
APH1AQ96BI3 OR10C1-204ENST00000622521 1039 ntBASIC18.31■□□□□ 0.52
APH1AQ96BI3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
APH1AQ96BI3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
APH1AQ96BI3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AC116050.2-201ENST00000612102 1779 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 FEM1AP4-201ENST00000443167 1987 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AC007322.3-201ENST00000426526 701 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AC133552.2-202ENST00000575694 574 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AL121832.2-201ENST00000610979 668 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
APH1AQ96BI3 AL049796.1-201ENST00000565336 1766 ntBASIC18.3■□□□□ 0.52
APH1AQ96BI3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.3■□□□□ 0.52
APH1AQ96BI3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.29■□□□□ 0.52
APH1AQ96BI3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
APH1AQ96BI3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APH1AQ96BI3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APH1AQ96BI3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 NCF1B-203ENST00000435988 1254 ntBASIC18.29■□□□□ 0.52
APH1AQ96BI3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 AF201337.1-201ENST00000520239 748 ntBASIC18.29■□□□□ 0.52
APH1AQ96BI3 FAM21FP-204ENST00000608637 956 ntBASIC18.29■□□□□ 0.52
APH1AQ96BI3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.29■□□□□ 0.52
APH1AQ96BI3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APH1AQ96BI3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
APH1AQ96BI3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 GPX1P1-201ENST00000388829 606 ntBASIC18.28■□□□□ 0.52
APH1AQ96BI3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
APH1AQ96BI3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms