Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF25Q96BH1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RNF25Q96BH1 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC21.66■■□□□ 1.06
RNF25Q96BH1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF25Q96BH1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF25Q96BH1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF25Q96BH1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 KRT87P-202ENST00000534226 1464 ntBASIC21.65■■□□□ 1.06
RNF25Q96BH1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF25Q96BH1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF25Q96BH1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF25Q96BH1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF25Q96BH1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF25Q96BH1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF25Q96BH1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RNF25Q96BH1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 AC027612.3-201ENST00000413684 1047 ntBASIC21.64■■□□□ 1.05
RNF25Q96BH1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RNF25Q96BH1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.64■■□□□ 1.05
RNF25Q96BH1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF25Q96BH1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RNF25Q96BH1 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF25Q96BH1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RNF25Q96BH1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RNF25Q96BH1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF25Q96BH1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF25Q96BH1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.63■■□□□ 1.05
RNF25Q96BH1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF25Q96BH1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF25Q96BH1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF25Q96BH1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RNF25Q96BH1 AC073314.1-201ENST00000568729 2216 ntBASIC21.61■■□□□ 1.05
RNF25Q96BH1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF25Q96BH1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF25Q96BH1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF25Q96BH1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 AC008175.2-201ENST00000612840 297 ntBASIC21.61■■□□□ 1.05
RNF25Q96BH1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF25Q96BH1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RNF25Q96BH1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF25Q96BH1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.6■■□□□ 1.05
RNF25Q96BH1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF25Q96BH1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF25Q96BH1 LINC02228-203ENST00000641970 1355 ntBASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms