Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 YBX1P4-201ENST00000392794 808 ntBASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 MTDHP2-201ENST00000601468 714 ntBASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 AC092028.1-203ENST00000608262 953 ntBASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMIM4Q8WVI0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 TSPY13P-201ENST00000338964 914 ntBASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 AL031848.2-201ENST00000607670 837 ntBASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SMIM4Q8WVI0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 AC006455.2-201ENST00000429931 906 ntBASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 ABHD17AP5-201ENST00000580133 923 ntBASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 AC125437.2-201ENST00000625180 2167 ntBASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMIM4Q8WVI0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 AL117332.1-201ENST00000622628 974 ntBASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.65■□□□□ 0.42
SMIM4Q8WVI0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMIM4Q8WVI0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.42
SMIM4Q8WVI0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 AL158211.5-201ENST00000623583 2518 ntBASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMIM4Q8WVI0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 HSD17B1P1-201ENST00000590052 955 ntBASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.63■□□□□ 0.41
SMIM4Q8WVI0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms