Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 AL355472.2-201ENST00000422958 438 ntBASIC21.04■□□□□ 0.96
CHD5Q8TDI0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD5Q8TDI0 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 AL121832.2-201ENST00000610979 668 ntBASIC21.03■□□□□ 0.96
CHD5Q8TDI0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD5Q8TDI0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 HLA-L-209ENST00000420110 1011 ntBASIC21.02■□□□□ 0.96
CHD5Q8TDI0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD5Q8TDI0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.01■□□□□ 0.95
CHD5Q8TDI0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 CYP2T3P-201ENST00000601990 817 ntBASIC21.01■□□□□ 0.95
CHD5Q8TDI0 AL109923.1-201ENST00000618799 583 ntBASIC21.01■□□□□ 0.95
CHD5Q8TDI0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD5Q8TDI0 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21■□□□□ 0.95
CHD5Q8TDI0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 AC093787.1-201ENST00000450396 207 ntBASIC21■□□□□ 0.95
CHD5Q8TDI0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21■□□□□ 0.95
CHD5Q8TDI0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21■□□□□ 0.95
CHD5Q8TDI0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21■□□□□ 0.95
CHD5Q8TDI0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
CHD5Q8TDI0 AC006128.1-201ENST00000624704 1661 ntBASIC21■□□□□ 0.95
CHD5Q8TDI0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHD5Q8TDI0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 AC073210.2-201ENST00000430369 194 ntBASIC20.99■□□□□ 0.95
CHD5Q8TDI0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.99■□□□□ 0.95
CHD5Q8TDI0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 TSPY6P-201ENST00000448518 926 ntBASIC20.99■□□□□ 0.95
CHD5Q8TDI0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CHD5Q8TDI0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 AC011484.1-201ENST00000377652 1995 ntBASIC20.98■□□□□ 0.95
CHD5Q8TDI0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 CLDN5-201ENST00000403084 2357 ntBASIC20.98■□□□□ 0.95
CHD5Q8TDI0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 AC105020.6-201ENST00000621523 1217 ntBASIC20.98■□□□□ 0.95
CHD5Q8TDI0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.98■□□□□ 0.95
CHD5Q8TDI0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms