Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
RTL9Q8NET4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC25.6■■□□□ 1.69
RTL9Q8NET4 AC087633.2-202ENST00000565166 1439 ntBASIC25.6■■□□□ 1.69
RTL9Q8NET4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RTL9Q8NET4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.59■■□□□ 1.69
RTL9Q8NET4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RTL9Q8NET4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.59■■□□□ 1.69
RTL9Q8NET4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
RTL9Q8NET4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC25.59■■□□□ 1.69
RTL9Q8NET4 AC142381.4-202ENST00000563973 229 ntBASIC25.59■■□□□ 1.69
RTL9Q8NET4 AC012676.1-201ENST00000574705 1949 ntBASIC25.59■■□□□ 1.69
RTL9Q8NET4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RTL9Q8NET4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC25.58■■□□□ 1.69
RTL9Q8NET4 AP006294.2-201ENST00000641667 209 ntBASIC25.58■■□□□ 1.69
RTL9Q8NET4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTL9Q8NET4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
RTL9Q8NET4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.58■■□□□ 1.69
RTL9Q8NET4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
RTL9Q8NET4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RTL9Q8NET4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL9Q8NET4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RTL9Q8NET4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.57■■□□□ 1.68
RTL9Q8NET4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RTL9Q8NET4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
RTL9Q8NET4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
RTL9Q8NET4 AC073648.6-201ENST00000641589 218 ntBASIC25.57■■□□□ 1.68
RTL9Q8NET4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RTL9Q8NET4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC25.57■■□□□ 1.68
RTL9Q8NET4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC25.56■■□□□ 1.68
RTL9Q8NET4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 PNMA6B-201ENST00000538162 1200 ntBASIC25.56■■□□□ 1.68
RTL9Q8NET4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
RTL9Q8NET4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.55■■□□□ 1.68
RTL9Q8NET4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
RTL9Q8NET4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC25.55■■□□□ 1.68
RTL9Q8NET4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RTL9Q8NET4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC25.55■■□□□ 1.68
RTL9Q8NET4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.55■■□□□ 1.68
RTL9Q8NET4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RTL9Q8NET4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC25.54■■□□□ 1.68
RTL9Q8NET4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC25.53■■□□□ 1.68
RTL9Q8NET4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC25.53■■□□□ 1.68
RTL9Q8NET4 RPS2P4-201ENST00000476944 856 ntBASIC25.53■■□□□ 1.68
RTL9Q8NET4 SLC29A4P2-201ENST00000504749 1089 ntBASIC25.53■■□□□ 1.68
RTL9Q8NET4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC25.53■■□□□ 1.68
RTL9Q8NET4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
RTL9Q8NET4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.52■■□□□ 1.68
RTL9Q8NET4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
RTL9Q8NET4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms