Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF248Q8NDW4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.77■□□□□ 0.75
ZNF248Q8NDW4 GUSBP5-202ENST00000510805 1989 ntBASIC19.77■□□□□ 0.75
ZNF248Q8NDW4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF248Q8NDW4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF248Q8NDW4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZNF248Q8NDW4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 Z99916.2-201ENST00000604037 246 ntBASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZNF248Q8NDW4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 AC079834.2-201ENST00000609776 1949 ntBASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 RN7SL471P-201ENST00000580476 299 ntBASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 AC100791.3-201ENST00000617619 330 ntBASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 AC127496.7-201ENST00000625110 1798 ntBASIC19.75■□□□□ 0.75
ZNF248Q8NDW4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 AL355472.2-201ENST00000422958 438 ntBASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 PNMA6B-201ENST00000538162 1200 ntBASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF248Q8NDW4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 FAM21FP-204ENST00000608637 956 ntBASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 AL589743.5-201ENST00000616611 1050 ntBASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF248Q8NDW4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 AC242852.2-201ENST00000615738 1807 ntBASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF248Q8NDW4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms