Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 AC005229.4-201ENST00000610085 2198 ntBASIC23.41■■□□□ 1.34
RETREG2Q8NC44 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.41■■□□□ 1.34
RETREG2Q8NC44 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.4■■□□□ 1.34
RETREG2Q8NC44 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RETREG2Q8NC44 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
RETREG2Q8NC44 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RETREG2Q8NC44 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 AC097658.1-201ENST00000475555 843 ntBASIC23.39■■□□□ 1.33
RETREG2Q8NC44 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RETREG2Q8NC44 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 PRORSD1P-201ENST00000295112 541 ntBASIC23.38■■□□□ 1.33
RETREG2Q8NC44 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RETREG2Q8NC44 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 KRT16P2-201ENST00000414673 1423 ntBASIC23.37■■□□□ 1.33
RETREG2Q8NC44 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RETREG2Q8NC44 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 RARRES2P4-201ENST00000514074 484 ntBASIC23.36■■□□□ 1.33
RETREG2Q8NC44 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RETREG2Q8NC44 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RETREG2Q8NC44 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms