Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC56Q8IYG6 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 AC006128.1-201ENST00000624704 1661 ntBASIC19.97■□□□□ 0.79
LRRC56Q8IYG6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 AC068338.2-201ENST00000563278 1430 ntBASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 CDCA4P2-201ENST00000441182 718 ntBASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 RAP2CP1-201ENST00000605103 478 ntBASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 AC073111.5-205ENST00000641717 521 ntBASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LRRC56Q8IYG6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 AL162412.1-201ENST00000567129 965 ntBASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 AL591742.1-201ENST00000604433 565 ntBASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 AC092666.2-201ENST00000613287 246 ntBASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 AC231657.2-201ENST00000624556 255 ntBASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LRRC56Q8IYG6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 AC007322.3-201ENST00000426526 701 ntBASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 AC016405.3-201ENST00000607710 860 ntBASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
LRRC56Q8IYG6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.93■□□□□ 0.78
LRRC56Q8IYG6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms